Identification of runs of homozygosity (ROHs) in Curraleiro Pé-Duro and Pantaneiro cattle breeds.

This study aimed to identify and characterize runs of homozygosis (ROHs), genes involved in production characteristics and adaptation to tropical systems and to estimate the inbreeding coefficient of Curraleiro Pé-Duro (CPD) and Pantaneiro (PANT), two brazilian locally adapted cattle breeds. The results demonstrated that 79.25% and 54.29% of ROH segments were bigger than 8 Mb in CPD and PANT, respectively, indicating recent inbred matings in the studied population. Six homozygosis islands were identified simultaneously in both breeds, where 175 QTLs and 1072 genes previously described as associated with production traits are located. The inbreeding coefficient (FROH) estimated based on ROHs (FROH) showed that inbreeding is low (2 to 4%), which is different from expected for small populations such as locally adapted ones.

Influence of the flood pulse on the reproduction of Tocantinsia piresi (Miranda Ribeiro) and Auchenipterus nuchalis (Spix & Agassiz) (Auchenipteridae) of the middle Xingu River, Brazil.

This study investigates the influence of the flood pulse on the reproductive biology of the auchenipterids Tocantisia piresi (Miranda Ribeiro, 1920) and Auchenipterus nuchalis (Spix & Agassiz, 1829) from the middle Xingu River in the Brazilian state of Pará. The specimens were collected every three months between April, 2012, and January, 2014, covering four distinct periods (flood, ebb, dry, and filling). The sex ratio, size at first maturity, gonadosomatic index, and condition factor were analysed in the two species, and evaluated in the context of the different hydrological periods. A total of 897 specimens of T. piresi were collected, of which 467 were female, and 430 males, and 383 A. nuchalis (286 females and 97 males). In T. piresi, the sex ratio was biased only in the filling and ebb periods, whereas in A. nuchalis, it departed significantly from the expected ratio of 1:1 in all periods, with a predominance of females. The female T. piresi mature at a smaller size than the males, with the opposite of the pattern being recorded in A. nuchalis. In T. piresi, the breeding peak was observed during the low water periods, whereas in A. nuchalis, the peak was recorded in the flood periods. Male and female T. piresi presented similar positively allometric growth rates, whereas in A. nuchalis, growth was negatively allometric, but rates were different between genders. A higher condition factor was recorded in the females of both species during the ebb period. Overall, the results of this study reveals distinct flood pulse effects on the reproductive parameters of the two auchenipterid species studied; for A. nuchalis the spawning seems to happen at the flood period and for T. piresi at the dry season of the middle Xingu River.

Influence of the flood pulse on the reproduction of Tocantinsia piresi (Miranda Ribeiro) and Auchenipterus nuchalis (Spix & Agassiz) (Auchenipteridae) of the middle Xingu River, Brazil / Influência do pulso de inundação na reprodução de Tocantinsia piresi (Miranda Ribeiro) e Auchenipterus nuchalis (Spix & Agassiz) (Auchenipteridae) do médio Rio Xingu, Brasil

This study investigates the influence of the flood pulse on the reproductive biology of the auchenipterids Tocantisia piresi (Miranda Ribeiro, 1920) and Auchenipterus nuchalis (Spix & Agassiz, 1829) from the middle Xingu River in the Brazilian state of Pará. The specimens were collected every three months between April, 2012, and January, 2014, covering four distinct periods (flood, ebb, dry, and filling). The sex ratio, size at first maturity, gonadosomatic index, and condition factor were analysed in the two species, and evaluated in the context of the different hydrological periods. A total of 897 specimens of T. piresi were collected, of which 467 were female, and 430 males, and 383 A. nuchalis (286 females and 97 males). In T. piresi, the sex ratio was biased only in the filling and ebb periods, whereas in A. nuchalis, it departed significantly from the expected ratio of 1:1 in all periods, with a predominance of females. The female T. piresi mature at a smaller size than the males, with the opposite of the pattern being recorded in A. nuchalis. In T. piresi, the breeding peak was observed during the low water periods, whereas in A. nuchalis, the peak was recorded in the flood periods. Male and female T. piresi presented similar positively allometric growth rates, whereas in A. nuchalis, growth was negatively allometric, but rates were different between genders. A higher condition factor was recorded in the females of both species during the ebb period. Overall, the results of this study reveals distinct flood pulse effects on the reproductive parameters of the two auchenipterid species studied; for A. nuchalis the spawning seems to happen at the flood period and for T. piresi at the dry season of the middle Xingu River.

Analisamos a influência do pulso de inundação na biologia reprodutiva dos auchenipterídeos Tocantisia piresi (Miranda Ribeiro, 1920) e Auchenipterus nuchalis (Spix & Agassiz, 1829) no médio rio Xingu, no Estado do Pará, Brasil. Os indivíduos analisados foram coligidos por meio de capturas trimestrais entre os meses de abril de 2012 a janeiro de 2014 contemplando os quatro períodos hidrológicos (cheia, vazante, seca e enchente). A proporção sexual, o tamanho de primeira maturidade sexual, o índice gonadossomático e o fator de condição foram analisados para as duas espécies, e avaliados em função dos diferentes períodos hidrológicos. Foram coletados 897 espécimes de T. piresi, sendo 467 fêmeas e 430 machos, e 383 A. nuchalis, sendo 286 fêmeas e 97 machos. Para T. piresi a proporção sexual variou apenas nos períodos de enchente e vazante, enquanto que para A. nuchalis a proporção variou entre todos os períodos hidrológicos, com uma proporção maior de fêmeas do que machos. Em relação ao tamanho mínimo da primeira maturação sexual, as fêmeas de T. piresi maturam com tamanho inferior aos dos machos, enquanto que o inverso foi registrado para A. nuchalis. Para T. piresi a maior atividade reprodutiva foi registrada nos períodos de seca e enchente, enquanto que para A. nuchalis a maior atividade foi registrada na enchente e cheia. Machos e fêmeas de T. piresi não diferiram entre os padrões de crescimento, ambos apresentaram crescimento alométrico positivo. Já para A. nuchalis, o padrão de crescimento diferiu entre os sexos, embora ambos tenham apresentado crescimento alométrico negativo. Para as fêmeas de ambas as espécies foram observadas um maior fator de condição no período da vazante. Assim, nossos resultados evidenciam que o pulso de inundação pode influenciar de maneiras distintas os parâmetros reprodutivos destas duas espécies de auchenipterideos, pois a desolva de A. nuchalis parece acontecer no período de cheia e de T. piresi para a época de seca do Médio Rio Xingu.